Friday, June 28, 2013

frankinscence oil for cancer

What would be a suggested dosage/method of application for tumors, particularly GIST?


"We have not had any clinical trial and cannot tell you a number, or success rates. Based on our “observation and experience”, for early stages of cancer, people use 20-60 drops (or 1-3 ml) a time, 3 times a day for frankincense essential oil. If any side effect developed, simply started with a lower volume and gradually increase to a target volume.

If patients are in late or terminal stages, frankincense oil needs to be “enriched” for high molecular weight compounds. Usually, in frankincense oil, it contains 60-80% low molecular weight compounds (monoterpenes); and we want to low this low molecular weight compounds to 10-20%. Dr. Suhail suggests to use the enriched formula at 0.2 ml/kg/day, and split the calculated volume to 3 times a day. However, I personally think that this is a “high” end to people in the US.

It depends on a lot of conditions. Also, patients responding to frankincense oil are very different from current medical knowledge about anti-cancer therapy. A lot of work need to be done.
Topical is NOT enough. When it applied topically, most of them gone to the air also. In addition, there are many large molecular weight compounds cannot be absorbed easily; and those large molecular weight compounds are playing a major role.
 
This is a guideline. Please let me know if you have a specific question(s).

HK

Wednesday, June 19, 2013

curcumin dosage

What do you think an ideal dose of Longvida would be for an adult with GIST or
other cancer? I see some human studies use high doses of 2000mg but I understand Longvida is
more bioavailable.

 we are trying to figure out this question in a trial. So far data suggests that for alzheimer prevention  2-3 capsules might be enough if it is going to work, but we are using 8 capsules in our trial.sinc more may be needed to impact the disease once you have it. It is not toxic.. but nevertheless, dose is critical for efficacy and too high and too low is not efficacious.  Luckily the efficacious range is quite large!

 if you are really serious about absorbing it with minimum number of capsules take it on a totally empty stomach and wait an hour before you eat.

I take 4 capsules  a day.. and my geriatric  dogs take half a capsule a day!

For cancer, i think it is very good at protecting from resistance to chemotherapy and between chemo to help healthy cells.. I wouldn't use it alone for cancer.. but if you did, you'd want to take probably more like 12 capsules a day. but in conjunction with chemo, 6-8 capsules should be fine…

I hope that is helpful….. more trials need to be done to test this, but no one is paying for the trials . they are just to expensive.. hopefully our trial will motivate others.. SF
PI3K inhibitors block an intraceullar pathway called PTEN-PI3K-AKT-mTOR. Blocking PI3K seems promising for many types of cancers, not just GIST. The trial for Gleevec plus a PI3K inhibitor is available at a few locations, notably Dana Farber in Boston, but others. The combination at least has a good theoretical rationale. THere isn't any publicly available data to know how GIST pts are doing in the trial. If this is a trial that interests you, then you would have to make an appt at one of the trial sites. You can find the trial at www.clinicaltrials.gov if you search for Gleevec BKM120.




Epigallocatechin gallate (EGCG), a major component of green tea, is a dual phosphoinositide-3-kinase/mTOR inhibitor.

Source

Department of Cancer Research, GlaxoSmithKline, Collegeville, PA 19426, USA. glenn.s.van.aller@gsk.com

Abstract

The PI3K signaling pathway is activated in a broad spectrum of human cancers, either directly by genetic mutation or indirectly via activation of receptor tyrosine kinases or inactivation of the PTEN tumor suppressor. The key nodes of this pathway have emerged as important therapeutic targets for the treatment of cancer. In this study, we show that (-)-epigallocatechin-3-gallate (EGCG), a major component of green tea, is an ATP-competitive inhibitor of both phosphoinositide-3-kinase (PI3K) and mammalian target of rapamycin (mTOR) with K(i) values of 380 and 320nM respectively. The potency of EGCG against PI3K and mTOR is within physiologically relevant concentrations. In addition, EGCG inhibits cell proliferation and AKT phosphorylation at Ser473 in MDA-MB-231 and A549 cells. Molecular docking studies show that EGCG binds well to the PI3K kinase domain active site, agreeing with the finding that EGCG competes for ATP binding. Our results suggest another important molecular mechanism for the anticancer activities of EGCG.



Curcumin inhibits Akt/mTOR signaling through protein phosphatase-dependent mechanism*

Abstract

Akt/mTOR signaling plays an important role in tumorigenesis and is dysregulated in many tumors, especially metastatic prostate cancers. Curcumin has been shown to effectively prevent or inhibit prostate cancer in vivo and inhibit Akt/mTOR signaling in vitro, but the mechanism(s) remains unclear. Here we show that curcumin concentration- and time-dependently inhibited the phosphorylation of Akt, mTOR, and their downstream substrates in human prostate cancer PC-3 cells, and this inhibitory effect acts downstream of PI3K and PDK1. Overexpression of constitutively activated Akt or disruption of TSC1-TSC2 complex by siRNA or gene knockout only partially restored curcumin-mediated inhibition of mTOR and downstream signaling, indicating they are not the primary effectors of curcumin-mediated inhibition of Akt/mTOR signaling. Curcumin also activated AMPK and MAP kinases, however, inhibition of these kinases failed to rescue the inhibition by curcumin. Finally, it was demonstrated that the inhibition of Akt/mTOR signaling by curcumin is resulted from calyculin A-sensitive protein phosphatase-dependent dephosphorylation. Our study reveals the profound effects of curcumin on the Akt/mTOR signaling network in PC-3 cells, and provides new mechanisms for the anti-cancer effects of curcumin.
Keywords: Curcumin, Akt, mTOR, AMPK, TSC1/TSC2, Protein phosphatase

Sunday, June 16, 2013

egcg and gist tumors

Green tea (-)-epigalocatechin-3-gallate inhibits KIT activity and causes caspase-dependent cell death in gastrointestinal stromal tumor including imatinib-resistant cells.

Source

Division of Ultrafine Structure, Department of Pathology, Research Institute of International Medical Center of Japan, Tokyo, Japan.

Abstract

Imatinib, a selective tyrosine kinase inhibitor, has been used as a standard first-line therapy for gastrointestinal stromal tumor (GIST) patients. Unfortunately, most patients responding to imatinib will eventually exhibit the resistance, the cause of which is not fully understood. The serious clinical problems of imatinib-resistance demand alternative treatment strategy. (-)-Epigallocatechin-3-gallate (EGCG), a main component of green tea catechin, has been demonstrated potential anti-tumor effects on various types of cancer cells. Here, we report for the first time that EGCG has shown anti-tumor effects on gastrointestinal stromal tumor cell line GIST-T1 by suppressing cell proliferation and eventually inducing cell death via caspase-dependent pathways. GIST-T1 and imatinib resistant GIST-T1 (GIST-T1 IR) cells were used to assess the effects of EGCG. In both cell types, KIT activity was completely inhibited after 4 h treatment with 60 muM EGCG. EGCG specifically inhibited activated KIT, which was demonstrated by using Ba/F3 cells transfected with human wild-type KIT construct. At a dose of 30 muM EGCG, the KIT activity remains but at more than 40 muM EGCG, the KIT activity was abolished in these transfected-Ba/F3 cells. Our results suggest that EGCG has a promising potential as a natural KIT inhibitor and therefore it could be used as a novel therapeutic or preventive reagent for GISTs including the imatinib-resistant cases.



Stomach cancer
Laboratory studies have found that green tea polyphenols inhibit the growth of stomach cancer cells in test tubes. The exposure of human stomach cancer KATO III cells to egcg led to both growth inhibition and the induction of programmed cell death (apoptosis) (Oncol Rep, 5(2):527-9 1998 Mar-Apr).


-----

DOSAGE

http://newsblog.mayoclinic.org/2010/06/04/green-tea-extract-appears-to-keep-cancer-in-check-in-majority-of-cll-patients/

The article that was published about this study is available at http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2727287/?tool=pubmed. The sentence defining the dosage states, “Polyphenon E with a standardized dose of epigallocatechin-3-gallate (EGCG) was administered using the standard phase I design with three to six patients per dose level (range, 400 to 2,000 mg by mouth twice a day).” The article later suggests that people tolerated the maximum dose well and that some people who received the higher doses seemed to do better in some respects, which is probably why they used the highest dosage in the next study. Still, as someone with no expertise in this area, I wouldn’t try to dose myself based on this information, and I can see why the Mayo people don’t want to specify a dosage in the context of patients asking what they should take. I went to an integrative medicine specialist at a major cancer center, who recommended 1,000 mg. twice a day. I’m not sure whether a regular oncologist would necessarily know about this; some of them tend to be dismissive of anything other than meds as such.


EM says:
I was diagnosed with CLL about 6 months ago. I am 52 years old, female and otherwise in really good health. Since it is very early in the diagnosis with no symptoms (other than some slightly enlarged lymph nodes), I have been in the watch and wait phase. My internist (who discovered the CLL through a routine blood test) prescribed a series of supplements included EGCG. I have been taking AOR Active Green tea (700mg/455 catechins) twice a day. Along with the EGCG I have also been taking Tumeric, Reservatrol, Vitamin D and Omega-3 Fish oil twice a day. I just went back for my check several weeks ago and the news was great! My WBC went down to 6800 from 11,500 and my LYMPH went down 51% from 61% and NEUT up to 36% from 31%! Yay! Of course, we can’t be 100% sure that is all the supplements at work, but I will take the good news nonetheless and continue with my course as is. I have also read “Anti-Cancer – A New Way of Life” by David Servan-Schrieber. Though at times it can be a bit technical, the diet/mind/body portion of it is wonderfully written and I would highly recommend it to read
 
 
 
Regarding changing genes: this is what I do, in induced pluripotent stem cells by gene targeting/genome editing, but all this is not, and will not be for a while, available for human clinical treatments. Concerning epigenetics: yes there are some studies on nutrition and epigentics but I am not that sure how would these apply to your case. In general epigenetics is a more an in vitro dicipline connected to chromatin modification analysis and whole organisms in vivo studies on epigenetics are not the rule.

expression of SPP1 is regulated epigenetically in GISTs, and high expression of SPP1 is a novel and independent prognostic parameter in GISTs.


My understanding is the expression of SPP1 is regulated epigenetically in GISTs, and high expression of SPP1 is a novel and independent prognostic parameter in GISTs.

Epigenetic regulation of Secreted Phosphoprotein 1 (SPP1) expression was analysed at mRNA and protein levels in GIST882 and GIST48b cells after treatment with a demethylating agent. Impacts on tumorigenesis-related signalling pathways were analysed by Western Blot after stimulation of GIST cell lines with SPP1.

Conclusion
The expression of SPP1 is regulated epigenetically in GISTs, and high expression of SPP1 is a novel and independent prognostic parameter in GISTs.

http://c953383.r83.cf2.rackcdn.com/file_attachment/attachments/8876/originalcfd8084a371c346654a98fd5c586daaf.html?1330573778

http://www.wikigenes.org/e/gene/e/6696.html

RELATION WITH MERCURY?  Unknown.


BREAST CANCER LINK.
Moreover, Spp1 expression correlates with disease prognosis for numerous cancers including breast cancer where it is associated with disease progression and metastasis.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2665764/



. http://en.wikipedia.org/wiki/Osteopontin#Potential_clinical_application "The fact that OPN interacts with multiple cell surface receptors which are ubiquitously expressed makes it an active player in many physiological and pathological processes including wound healing, bone turnover, tumorigenesis, inflammation, ischemia and immune responses1. Therefore, manipulation of plasma OPN levels may be useful in the treatment of autoimmune diseases, cancer metastasis, osteoporosis and some forms of stress.[2]"


 Ssecreted phosphoprotein 1 (SPP1) OR Osteopontin (OPN), also known as bone sialoprotein I (BSP-1 or BNSP), early T-lymphocyte activation (ETA-1), secreted phosphoprotein 1 (SPP1), 2ar and Rickettsia resistance (Ric), is a human gene product,[1] which is also conserved in other species. Osteopontin is a SIBLING glycoprotein that was first identified in 1986 in osteoblasts.

Potential clinical application

The fact that OPN interacts with multiple cell surface receptors which are ubiquitously expressed makes it an active player in many physiological and pathological processes including wound healing, bone turnover, tumorigenesis, inflammation, ischemia and immune responses1. Therefore, manipulation of plasma OPN levels may be useful in the treatment of autoimmune diseases, cancer metastasis, osteoporosis and some forms of stress.[2]

Role in autoimmune diseases

OPN has been implicated in pathogenesis of rheumatoid arthritis. For instance, researchers found that OPN-R, the thrombin-cleaved form of OPN, was elevated in the rheumatoid arthritis joint. However, the role of OPN in rheumatoid arthritis is still unclear. One group found that OPN knock-out mice were protected against arthritis.[47] while others were not able to reproduce this observation.[48] OPN has been found to play a role in other autoimmune diseases including autoimmune hepatitis, allergic airway disease, and multiple sclerosis.[49]

Role in cancers and inflammatory diseases

It has been shown that OPN drives IL-17 production;[50] OPN is overexpressed in a variety of cancers, including lung cancer, breast cancer, colorectal cancer, stomach cancer, ovarian cancer, papillary thyroid carcinoma, melanoma and pleural mesothelioma; OPN contributes both glomerulonephritis and tubulointerstitial nephritis; and OPN is found in atheromatous plaques within arteries. Thus, manipulation of plasma OPN levels may be useful in the treatment of autoimmune diseases, cancer metastasis, osteoporosis and some forms of stress.[2]
Research has implicated osteopontin in excessive scar-forming and a gel has been developed to inhibit its effect.[51]

Role in allergy and asthma

Osteopontin has recently been associated with allergic inflammation and asthma. Using a murine model of allergic inflammation, it was demonstrated that OPN-s, the secreted form of OPN, exerts opposing effects on mouse Th2 effector responses and subsequent allergic airway disease: pro-inflammatory at primary systemic sensitization, and anti-inflammatory during secondary pulmonary antigenic challenge, mainly through the regulation of different dendritic cell subsets.[52] OPN deficiency was also reported to protect against remodeling and bronchial hyperresponsiveness (BHR), again using a chronic allergen-challenge model of airway remodeling.[53] Furthermore, it was recently demonstrated that OPN expression is upregulated in human asthma, is associated with remodeling changes and its subepithelial expression correlates to disease severity.[54] OPN has also been reported to be increased in the sputum supernatant of smoking asthmatics,[55] as well as the BALF and bronchial tissue of smoking controls and asthmatics.[56]

Role in muscle disease and injury

Evidence is accumulating that suggests that osteopontin plays a number of roles in diseases of skeletal muscle, such as Duchenne muscular dystrophy. Osteopontin has been described as a component of the inflammatory environment of dystrophic and injured muscles,[22][57][58][59] and has also been shown to increase scarring of diaphragm muscles of aged dystrophic mice.[60] A recent study has identified osteopontin as a determinant of disease severity in patients with Duchenne muscular dystrophy.[61] This study found that a mutation in the osteopontin gene promoter, known to cause low levels of osteopontin expression, is associated with a decrease in age to loss of ambulation and muscle strength in patients with Duchenne muscular dystrophy.



MANIPULATION OF OSTEOPONTIN/SPP1

 

The Dietary Supplement Protandim® Decreases Plasma Osteopontin and Improves Markers of Oxidative Stress in Muscular Dystrophy Mdx Mice


 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2926985/

 The nutritional supplement Protandim® has been shown to reduce plasma TBARS by approximately 40% in healthy human subjects after 4 months of treatment, with significant inductions of the antioxidant enzymes superoxide dismutase and catalase

Our data demonstrate a remarkably similar finding in mdx mice with a reduction in plasma TBARS of approximately 48% after 6 months of treatment. Our plasma TBARS result suggests that induction of antioxidant enzymes by a combination of phytochemicals reduces oxidative stress in mdx mice.

  • which is nearly equivalent to the manufacturers recommended human dose of 675 mg per day for a 60 kg adult, or 422 mg/m2.
It is composed of the following phtyochemicals: (1) Bacopa monniera extract (45% bacosides), 150 mg; (2) Silybum marianum extract (70%–80% silymarin), 225 mg; (3) Withania somnifera (Indian ginseng) powder, 150 mg; (4) green tea extract (Camellia sinensis, 98% polyphenols and 45% epigallocatechin-3 gallate), 75 mg; and (5) curcumin (95%) from Curcuma longa, 75 mg. Individual ingredients of Protandim® are well-known antioxidants that cause induction of SOD and catalase in rodents and diminish cellular lipid peroxidation.




  • Abstract

    Osteopontin (OPN) is a secreted, integrin-binding matrix phosphorylated glycoprotein that is overexpressed in many advanced cancers. However, the functional mechanisms by which OPN contributes to gastric cancer development are poorly understood. Here, we report that curcumin inhibited the growth of SGC7901 cell and induced apoptosis in a concentration- and time-dependent manner, while the acquired expression of OPN in SGC7901 cells dramatically promoted cell survival under serum depletion and prevented curcumin-induced apoptosis. Furthermore, PI3-K inhibitor LY294002 attenuated OPN-mediated Akt activation. Moreover, inhibiting the binding of OPN to αvβ3 integrins reduced activation of Akt. Taken together, these results demonstrate that the pro-survival and anti-apoptosis activities of OPN in gastric cancer cells are mediated in part through PI3-K/Akt pathway via αvβ3 integrins.



    Therapeutic effects of epigallocatechin gallate on streptozotocin-induced diabetic nephropathy in mice.

    http://www.krcp-ksn.com/article/S2211-9132%2812%2900472-X/abstract
    Diabetic nephropathy is one of the most serious complications in diabetes mellitus and has been the most common cause of end-stage renal disease. Green tea extracts have antioxidant properties, and (-)-epigallocatechin 3-O-gallate (EGCG) is known to be the most abundant in green tea. Osteopontin (OPN) is a large phosphoglycoprotein adhesion molecule, and has emerged as a potentially key pathophysiologic contributor in diabetic nephropathy. We examined whether EGCG could amelliorate the development of diabetic nephropathy and its role of OPN. The mice (n=28) were divided into 3 groups. Control group (n=7) was intraperitoneal (IP) injected 0.9% saline, Streptozotocin (STZ) group (n=7) was IP injected STZ 200mg/Kg and induced diabetic nephropathy. After a 8weeks, EGCG groups (n=7/each group) were received EGCG 50mg/kg and 100mg/kg body weight by subcutaneous injection. Serum glucose, blood urea nitrogen, serum creatinine, urine volume and urine protein amounts were measured. Western blot assay of OPN was compared for the different groups. Histopathologic examination and immunohistochemical staining of mice kidney were performed. Compared with control group, STZ-group showed an increase in blood glucose, blood urea nitrogen, creatinine levels and urine protein amounts, and a decrease in body weight. All the above parameters were significantly reversed with EGCG treatment. After STZ injection, there were an diabetic glomerulosclerosis with increased renal OPN accumulation and its protein expression in the kidney cortex. EGCG-treated mice kidney showed a reduced expression of above parameters and an reserved pathologic findings. These results suggest that EGCG ameliorates STZ-induced diabetic nephropathy by OPN suppression. The potential use of EGCG in the treatment of diabetic nephropathy should be further explored.

Hello, I'm new here. Doctors found a partially calcified 6cm GIST outside of the stomach. What causes this?

Hello, I'm new here. Doctors found a partially calcified 6cm GIST outside of the stomach. What causes this? Has anyone treated it successfully naturally without surgery/drugs?
Like · · Unfollow Post · · June 1 at 2:23pm

  • Erin Parker likes this.
  • Beverly Shirts Surgery is your best bet for a cure. Here is some good information for you. I'm running out now but will check with you later. http://www.gistsupport.org/for-new-gist-patients.php If you only have one tumor and it's removed completely, you may not need chemo drugs at all.

    www.gistsupport.org
    Newly diagnosed GIST patients learn here what to ask your doctor, about pathology reports and tissue samples, finding good care for GIST cancer.
  • Brown Rice Thanks. From the site: "Random genetic mutations are the apparent cause of GISTs." I doubt surgery cures genetic mutations. If you remove it, won't it simply return if the cause isn't addressed? What causes those mutations in the first place?
  • Cathy Freeman I've been down this road and am still in the midsts of all the information . . . Do you have a genetic mutation. Mine is SDHB and the meds to date aren't known to be effective on SDHB mutations. I'm going to the NCI in a few weeks for their annual Pediatric Gist Clinic as well as a Paraganglioma Clinic which is the rare tumors my father and aunt died of (and what I inherited). I'll be talking to head doctors but from my knowledge to date surgery is my best option. I had 1/3rd of my stomach removed 5 years ago and 2/3rds of my liver last year (which grew back). The next set of tumors, for me, could appear anywhere in the torso or head. I don't think in my case there is a medication that has proven itself thus I take it one day at a time with some emotional issues hanging around the curtain edges. My genetic mutation wasn't random. It was inherited from my father and his sister also had it (all the children in his family and his sister didn't have chlldren). For me surgery was my best bet and gave me a few years between tumors.
  • Beverly Shirts Mine has never returned, and I've never been on Gleevec or any other drug. 12 1/2 cm stomach primary tumor, 5 per 50 mitotic rate. My only surgery was in August of 2000.
  • Michele Arsenault I honestly can't think of anyone who has not treated their GIST (or any other cancer) without surgery, medication or a combination of both sucessfully.
  • Mandi Lobisser Beverly do you get scans? I'm still on the fence about Gleevec.
  • Brown Rice Help me understand the cause: Tumors are caused by genetic mutations, which is different than DNA damage. Is that correct? What causes these random or inherited mutations? And shouldn't DNA repair genes have the ability to correct mutations and maintain genomic integrity?
  • Beverly Shirts Mandi Lobisser I'm at yearly scans right now, but mostly to monitor two other issues, completely non GIST related. I'm deciding now about continuing them. Brown Rice no one knows what causes most cancers. Please check on our site for all of the genetic "what causes this" science information, written by scientists who explain it well. I'll also put out the bat signal for Marina Symcox, a PhD in such things, and a GIST patient as well. She's in Oklahoma though, so I am not sure if she has power. Start here and follow the links. You can also type in search words, such as "causes" or "mutations" etc. on that site to bring up more info. http://www.gistsupport.org/for-new-gist-patients.php If your tumor is smallish, and yours is, and the mutation rate is low, surgery has a very good chance of curing you. Where are you being seen?

    www.gistsupport.org
    Newly diagnosed GIST patients learn here what to ask your doctor, about pathology reports and tissue samples, finding good care for GIST cancer.
  • Brown Rice Beverly Shirts thanks, but I couldn't find it on that site. But I found on genetics.Utah.edu that genetic mutations are caused by chemicals, radiation, and errors when the DNA is replicated. The cause of these errors are caused by DNA damage during cell division. Basically, it comes down to DNA damage? If so, what would repair DNA damage and correct mutations? I'd love to hear from Marina Symcox !
  • Beverly Shirts She will check in. http://www.gistsupport.org/about-gist/what-is-gist.php?searchresult=1&sstring=what+causes+gist%3F#wb_98 I just typed in "what causes GIST?" on our site and SEVERAL links came up. This is one.

    www.gistsupport.org
    Gastrointestinal stromal tumor (GIST) is a very rare cancer affecting the digest...See More
  • Beverly Shirts There is much more at that link, but here is one part. What causes GIST?

    There are no known environmental or behavioral risk factors contributing to GIST. Therefore, patients should not worry that their diet or lifestyle choices contributed to GIST.
    Random genetic mutations are the apparent cause of GISTs. The majority of GISTs show identified mutations in cell-surface proteins called tyrosine kinase receptors. These mutations are discussed further in the pages on Diagnosis and Pathology Results as well as Mutation Analysis. Most GISTs show mutations in a gene that produces a growth factor receptor called KIT. A few GISTs show mutations in the gene for a closely related receptor for platelet derived growth factor receptor alpha (PDGFR a or PDGFRA). A few GISTs are normal or “wildtype” for both these genes, and the causal mutations or these GISTs have not been identified. Almost all GISTs are sporadic, meaning that the mutations are random occurrences affecting a single individual. However, there are rare examples of GIST running in families due to an inheritable germline mutation (see Familial GIST page). In addition, people affected by neurofibromatosis type 1 (NF1) have an increased chance of developing GIST (see our page GIST in NF1).
  • Brown Rice Yeah, that's what I found earlier and quoted from the site: "Random genetic mutations are the apparent cause of GISTs. " but no information on what causes genetic mutations, specifically.
  • Brown Rice Thanks! I also found this helpful http://learn.genetics.utah.edu/archive/sloozeworm/mutationbg.html and http://en.wikipedia.org/wiki/Mutation#Harmful_mutations

    learn.genetics.utah.edu
    Ultraviolet light, nuclear radiation, and certain chemicals can damage DNA by altering nucleotide bases so that they look like other nucleotide bases.
  • Beverly Shirts It's kind of a s*** happens thing really. What causes gene mutations?
    Chemicals and radiation can damage genes. However, most mutations occur when the cell makes errors as it copies its genes. Ge
    ...See More

  • Brown Rice "A DNA damage can cause an error when the DNA is replicated, and this error of replication can cause a gene mutation that, in turn, could cause a genetic disorder. DNA damages are repaired by the DNA repair system of the cell.
    Because DNA can be damaged in many ways, the process of DNA repair is an important way in which the body protects itself from disease.' http://en.wikipedia.org/wiki/Mutation#Harmful_mutations


    en.wikipedia.org
    Changes in DNA caused by mutation can cause errors in protein sequence, creating partially or completely non-functional proteins. Each cell, in order to function correctly, depends on thousands of proteins to function in the right places at the right times. When a mutation alters a protein that play...
  • Brown Rice Is it caused by an impaired DNA repair system?
    In my case, 'chemicals/radiation' exposure, would probably be the main cause of DNA damage. I was tested with high mercury and arsenic levels.
  • Brown Rice Please correct me if I'm wrong. So in conclusion, GIST is caused by random or inherited genetic mutations caused by errors in DNA replication from DNA damage either by radiation, chemicals, or "many other factors" that should be repaired by our DNA repair system, unless that system is also damaged.
  • Beverly Shirts I'll leave it for Marina Symcox, she is wonderful at explaining complicated science in understandable terms. As the first sentence says on our site, no known cause exists for GIST. As it says on those pages above and on our site, it's random, and most are born with some kind of defect, and defects are also the way species evolve. Radiation and chemical exposure, as far as I know, has no known correlation to GIST.
  • Beverly Shirts You may find something here as well. http://gistsupport.medshelf.org/Marina_Sez
    gistsupport.medshelf.org
    Marina Symcox, PhD is a born teacher. Trained in biochemistry, she turned her co...See More
  • Brown Rice That's a bit more helpful, but still doesn't explain what causes these mutations? And what is the role of epigenetics in turning on or silencing these mutations? "The genome dynamically responds to the environment. Stress, diet, behavior, toxins and other factors activate chemical switches that regulate gene expression." http://learn.genetics.utah.edu/content/epigenetics/

    learn.genetics.utah.edu
  • Marina Symcox Tumors can partially calcify. Laying down calcium deposits is the way the body sequesters off dead tissue. Even growing tumors may develop dead zones that show signs of calicification. A tumor that has been treated well with Gleevec may show much calcification over the course of years as the tumor remains under control.
  • Marina Symcox DNA damage can lead to mutations, just like stumbling around with your fingers on a keyboard can lead to typographical errors. While the cells have mechanisms to repair damaged DNA, sometimes the repair does not happen, and at some point both strands of the DNA are compatible with the change, and it becomes heritable to all the daughter cells. The mutations in GIST are not usually heritable, and are not passed down through a family. Instead they are accidental mishaps in one cell, and all of the daughter cells from that one cell will carry the mutation. The rest of the cells in the body will not have that mutation. Very rarely there are heritable mutations in GIST (egg and sperm carry them and all the cells in the body have the mutation.) This is extremely rare, only a handful of families in the entire world have heritable GIST.
  • Marina Symcox You will never know what caused the mutation that lead to your GIST. While we can blame toxins in the enviroment, the oxygen that we breathe to live also has the capacity to damage DNA. The role of epigenetics in cancer is important, but not as well delineated as the role of DNA mutations. The GIST that forms in young women seems to be driven not by mutations but by epigenetic siliencing of key genes. For now, adult GIST is mostly considered in terms of mutations and not epigenetics, but epigenetics has a role in all types of cancer.
  • Brown Rice Thanks Marina Symcox! Can you expand on this statement: "The GIST that forms in young women seems to be driven not by mutations but by epigenetic siliencing of key genes. " What key genes are silenced and where are the studies on this? I see a study here for example on how certain epigenetic changes predict GIST behavior http://meeting.ascopubs.org/cgi/content/abstract/24/18_suppl/9542
    meeting.ascopubs.org
    Instituto Nacional de Cancer, Rio de Janeiro, Brazil; Consultoria em Patologia, Botucatu, Brazil; Novartis Oncology, São Paulo, Brazil
  • Brown Rice Given that epigenetic changes predict GIST behaviour, does that mean that they can be 'turned off' or 'turned on'? My understanding of epigenetics is 'harmful' mutations (whatever the cause may be -environmental toxins or oxygen) can be silenced or activated by histone inhibitors for example, is that correct?

    "Inappropriate epigenetic activity plays a significant role in cancer development but, unlike DNA mutations, which are permanent, epigenetic changes can be reversed. This means that it may be possible to find a way to regulate inappropriate epigenetic activity or to get a gene that is inappropriately expressed due to epigenetic changes to begin functioning normally again. The team is using a combination of two drugs (a DNA-demethylating agent, and a histone deacetylase inhibitor) to reverse the epigenetic modifications that inappropriately turned genes on or off in cancer cells. " http://www.aacr.org/home/public--media/stand-up-to-cancer/su2c-dream-teams/bringing-epigenetic-therapy-to-the-forefront-of-cancer-management.aspx

    I understand that histone deacetylase inhibitors has been used as a therapeutic strategy for GISTs.
    http://carcin.oxfordjournals.org/content/33/9/1674.abstract


    www.aacr.org
    Researchers have discovered that there are additional layers of material outside...See More
  • Marina Symcox While there are drugs that can affect the epigenetic or gene silencing aspect of DNA, these drugs are not specific for what is wrong in your GIST. HDACi are a class of such drugs.
  • Brown Rice Marina Symcox What I'm trying to understand is can the genes involved GIST be silenced or activated? You mentioned earlier that "The GIST that forms in young women seems to be driven not by mutations but by epigenetic siliencing of key gene." Does that mean they can be 'turned on/off' in epigenetic terms? Sorry for all the questions, I appreciate this dialogue and it has helped me gain a better understanding.
  • Marina Symcox I don't think there are any drugs that offer a fine level of control for turning off or on aspecific "GIST genes." GIST that develops in young females primarily involves a loss of function of the succinate dehydrogenase gene, and it seems that a build up of the metabolic products caused by this defect will impact the proteins that regulate the methylation level of DNA...so over time the cells have too much gene silencing of tumor suppressor genes.